BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A10LP1|AL428833
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1592 1653 0.0
>3x_Contig1592
Length = 12307
Score = 1653 bits (832), Expect = 0.0
Identities = 859/870 (98%)
Strand = Plus / Plus
Query: 1 tcgctttctttctatgagcagagatgtgatgacaaagggtggcaaaaacacacagagaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4669 tcgctttctttctatgagcagagatgtgatgacaaagggtggcaaaaacacacagagaag 4728
Query: 61 gatggaaaaaaaacagaactcgtgcttcgctaatcaaagagattatgtagacacactcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4729 gatggaaaaaaaacagaactcgtgcttcgctaatcaaagagattatgtagacacactcta 4788
Query: 121 gtttctaatgtgattctgaacctgaattgaccttagttgacaaagatcctcaaccaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4789 gtttctaatgtgattctgaacctgaattgaccttagttgacaaagatcctcaaccaagta 4848
Query: 181 tgggatttgagcctgaagactgtgtagcttgaagtttgtttgatttaaacctttgttccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4849 tgggatttgagcctgaagactgtgtagcttgaagtttgtttgatttaaacctttgttccc 4908
Query: 241 ctgtwaaataaagcaagtttaaactttctaaatgaaaataatataaaatatctcttattc 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4909 ctgtaaaataaagcaagtttaaactttctaaatgaaaataatataaaatatctcttattc 4968
Query: 301 taaaaaaaagaacccaaacgtattaataatataatatacgttcaaaagaagcgggattag 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4969 taaaaaaaagaacccaaacgtattaataatataatacacgttcaaaagaagcgggattag 5028
Query: 361 aaaggagataacagagaaaaaaaagtaacacgaagcgaccctttaagagagaaaaggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5029 aaaggagataacagagaaaaaaaagtaacacgaagcgaccctttaagagagaaaaggaag 5088
Query: 421 aagcatcagagaggcggaggactactattttaaatgaggtgaaaagggttaaattgtaga 480
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5089 aagcatcaaagaggcggaggactactattttaaatgaggtgaaaagggttaaattgtaga 5148
Query: 481 gagtagcgcgtacaacctagtttatgaatcattttaactggcaagacaaggttaatgtcg 540
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5149 gagtagcgcgtagcaactagtttatgaatcattttaactggcaagacaaggttaatgtcg 5208
Query: 541 tcgtttttgttttttttagcaaataccgatgagtttgtacggctaaacttttcagaaagg 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5209 tcgtttttgttatttttagcaaataccgatgagtttgtacggctaaacttttcagaaagg 5268
Query: 601 catgttgtttgcmatgatcggccggcacgagttggatggttagcaattaccgagtagagt 660
||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5269 catgtagtttgcaatgatcggccggcacgagtaggatggttagcaattaccgagtagagt 5328
Query: 661 gaggagggagagaatgccaagggcttgataatatgaagcgcaaggggtggctggcgaggg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5329 gaggagggagagaatgccaagggcttgataatatgaagcgcaaggggtggctggcgaggg 5388
Query: 721 gtaaactgaggggtgcacccgaacttgctttcccgtttcctcctatggttgcgatactac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5389 gtaaactgaggggtgcacccgaacttgctttcccgtttcctcctatggttgcgatactac 5448
Query: 781 tttgtgtatgtwataagcaggtcaccgggtaatattgcactacagatactaaagtatagc 840
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5449 tttgtgtatgtaataagcaggtcaccgggtaatattgcactacagatactaaagtatagc 5508
Query: 841 aataacggagaaaatgtgtgagtttatccg 870
||||||||||||||||||||||||||||||
Sbjct: 5509 aataacggagaaaatgtgtgagtttatccg 5538
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7478
Number of Sequences: 1807
Number of extensions: 7478
Number of successful extensions: 64
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)